pathway.yeastgenome.orgYeastPathways Database Website Home

User web site style sheet customization should use the following file: The previous 4 .css files are combined at web start up time by the Lisp fn publish-combined-static-files generating the following combined.css file. For some reason it doesn't work for the yui gallery file to be combined -- the yui loader still looks for it as a separate file. -- -- hide show operations OPERATIONS Searching change organism database Home Search Search Genes, Proteins or RNAs Search Compounds Search Reactions Search Pathways Search DNA or mRNA Sites Search Growth Media Advanced Search BLAST Search Sequence Pattern Search Google Search of this Site Genome Genome Browser Genome Overview Regulatory Overview Browse Gene Ontology Map Sequence Coordinates Metabolism Cellular Overview Run Metabolic Model Dead-end Metabolites Chokepoint Reactions Metabolic Route Search Metabolite Translation Service Pathway Collages Browse Pathway Ontology Browse Enzyme Commission Ontology Browse Compound Ontology Generate Metabolic Map Poster Analysis Comparative Analysis Omics Data Analysis Omics Dashboard Summary Statistics Reports History of updates Pathway evidence Pathway holes Help Searching Website User Guide Glossary PGDB Concepts Guide Contact Us/Support YeastPathways -- This page offers tools to query, visualize, and analyze biochemical pathways of Saccharomyces cerevisiae at SGD. Description YeastPathways is a database of metabolic pathways and enzymes in the budding yeast Saccharomyces cerevisiae . YeastPathways content is manually curated and maintained by the curation team at the Saccharomyces Genome Database (SGD) , the model organism database for budding yeast. Only genes involved in metabolic pathways and reactions are included in YeastPathways. For the complete S. cerevisiae genome, visit the main Saccharomyces Genome Database website . Manual curation of pathways is an ongoing process at SGD. We welcome feedback from the research community. Please feel free to contact us with any questions or comments. Yeast Biochemical Pathway Database at SGD was built using the Pathway Tools software developed by Peter Karp and his colleagues at the Bioinformatics Res0$earch Group at SRI International. Since then, each pathway has been manually reviewed and curated from the scientific literature. Manual curation of pathways is an ongoing process at SGD and we welcome feedback from the research community. -- YeastCyc collection of pathways available at SRI offers a superset of both predicted and manual curated pathways for S. cerevisiae . More about building Yeast Biochemical Pathways. -- Tools YeastPathways at SGD was built using the Pathway Tools software developed by Peter Karp and colleagues at the Bioinformatics Research Group at SRI International. YeastPathways enables you to: Search for pathways individually or part of a cellular overview Browse through the full list of curated pathways Overlay high-throughput experimental data from microarray expression studies, proteomics, and metabolomcs on the cellular overview And much more ... check SGD -- Compare pathway data from S. cerevisiae to that of other organisms using the Comparative Analysis tool. -- Contact SGD Please email SGD curators with any suggestions or corrections. tags) since a non conforming HTML may affect the entire page. This file must be self contained. -- Specify List of Organism Databases Select One or More Databases: By Name By Taxonomy A B C D E F G H I J K L M N O P Q R S T U V W X Y Z Find in tree: Tier 1 and Tier 2 databases are displayed with orange and gray backgrounds, respectively. Current Selection 0 databases or taxonomic groups currently selected....